Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | AO062_05135 | Not Available | Negative | 1122746 - 1124842 | 77687.7 |
| phospholipase | AO062_05140 | Not Available | Positive | 1125017 - 1126609 | 58354.4 |
| tonb-dependent receptor | AO062_05145 | Not Available | Positive | 1126920 - 1129049 | 77440.3 |
| amino acid abc transporter permease | AO062_05150 | Not Available | Negative | 1129057 - 1129746 | 24769.9 |
| glutamate abc transporter permease | AO062_05155 | Not Available | Negative | 1129746 - 1130483 | 27081.9 |
| amino acid transporter | AO062_05160 | Not Available | Negative | 1130539 - 1131414 | 31921.6 |
| cystathionine beta-lyase | AO062_05165 | Not Available | Negative | 1131488 - 1132660 | 41864.5 |
| hypothetical protein | AO062_05170 | Not Available | Negative | 1132669 - 1133097 | 15583.8 |
| lysr family transcriptional regulator | AO062_05175 | Not Available | Positive | 1133219 - 1134154 | 33999.9 |
| copper-transporting atpase | AO062_05180 | Not Available | Negative | 1134135 - 1136357 | 77918.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
