Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain PHE5-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1072012 bp
Thymine Count
1070008 bp
Guanine Count
2302561 bp
Cytosine Count
2323682 bp
Genome Length
6768263 bp
Protein-coding Genes
6052 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarylacetoacetate hydrolase | AO062_00485 | Not Available | Negative | 95290 - 96162 | 30455.9 |
| 4-hydroxybutyrate dehydrogenase | AO062_00490 | Not Available | Positive | 96226 - 97362 | 39962.2 |
| type vi secretion protein vgr | AO062_00495 | Not Available | Positive | 97538 - 99880 | 86660.2 |
| hypothetical protein | AO062_00500 | Not Available | Positive | 99897 - 100334 | 15589.1 |
| hypothetical protein | AO062_00505 | Not Available | Positive | 100340 - 102997 | 98359.8 |
| low-complexity protein | AO062_00510 | Not Available | Positive | 102994 - 104118 | 40701.4 |
| hypothetical protein | AO062_00515 | Not Available | Positive | 104115 - 104801 | 24632.6 |
| type vi secretion protein | AO062_00520 | Not Available | Positive | 104823 - 105209 | 13493.8 |
| mfs transporter | AO062_00525 | Not Available | Negative | 105225 - 106211 | 34614.7 |
| phospholipase | AO062_00530 | Not Available | Negative | 106307 - 107383 | 40017.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
