Pseudomonas sp. ICMP 460

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. ICMP 460 is characterized by having a single replicon. This trait is significant as it suggests a streamlined genomic organization that can influence the bacterium's adaptability and metabolic versatility. The accession number for this strain is LKBR00000000.1, which provides a reference for genetic and genomic studies. Pseudomonas species are known for their diverse metabolic capabilities, allowing them to thrive in various environments, including soil and water. They play essential roles in nutrient cycling and can contribute to the degradation of pollutants, making them important for bioremediation efforts. The specific traits of Pseudomonas sp. ICMP 460 may further enhance its ecological functions, particularly in environments where it interacts with other microorganisms or plants. In summary, Pseudomonas sp. ICMP 460, with its single replicon as noted in accession LKBR00000000.1, exemplifies the ecological significance of Pseudomonas species in environmental microbiology and their potential applications in biotechnological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. ICMP 460
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. ICMP 460
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. ICMP 460 scaffold93, whole genome shotgun

Gene Summary

Adenine Count

1240096 bp

Thymine Count

1222296 bp

Guanine Count

1793937 bp

Cytosine Count

1827151 bp

Genome Length

6084066 bp

Protein-coding Genes

5091 genes

Non-Coding Genes

227 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
atp-dependent protease subunit hslvAO240_25970Not AvailablePositive5937076 - 593760618705.5
atp-dependent protease atp-binding subunit hsluAO240_25975Not AvailablePositive5937644 - 593898149617.8
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomeraseAO240_25980Not AvailablePositive5939130 - 593950713983.8
poly(3-hydroxyalkanoate) granule-associated protein phafAO240_25985Not AvailableNegative5939696 - 594059229527.6
polyhydroxyalkanoic acid system proteinAO240_25995Not AvailableNegative5941132 - 59414079767.96
ubiquinone biosynthesis methyltransferase ubieAO240_26000Not AvailablePositive5941552 - 594232228338.3
sterol-binding proteinAO240_26005Not AvailablePositive5942322 - 594294522985.5
ubiquinone biosynthesis protein ubibAO240_26010Not AvailablePositive5942942 - 594454661470.4
phosphoribosyl-amp cyclohydrolaseAO240_26015Not AvailablePositive5944588 - 594498015030.9
phosphoribosyl-atp pyrophosphataseAO240_26020Not AvailablePositive5944983 - 594531512015.1

Displaying genes 5191 – 5200 of 5318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.