Pseudomonas sp. ICMP 460

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. ICMP 460 is characterized by having a single replicon. This trait is significant as it suggests a streamlined genomic organization that can influence the bacterium's adaptability and metabolic versatility. The accession number for this strain is LKBR00000000.1, which provides a reference for genetic and genomic studies. Pseudomonas species are known for their diverse metabolic capabilities, allowing them to thrive in various environments, including soil and water. They play essential roles in nutrient cycling and can contribute to the degradation of pollutants, making them important for bioremediation efforts. The specific traits of Pseudomonas sp. ICMP 460 may further enhance its ecological functions, particularly in environments where it interacts with other microorganisms or plants. In summary, Pseudomonas sp. ICMP 460, with its single replicon as noted in accession LKBR00000000.1, exemplifies the ecological significance of Pseudomonas species in environmental microbiology and their potential applications in biotechnological processes.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. ICMP 460
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. ICMP 460
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. ICMP 460 scaffold93, whole genome shotgun

Gene Summary

Adenine Count

1240096 bp

Thymine Count

1222296 bp

Guanine Count

1793937 bp

Cytosine Count

1827151 bp

Genome Length

6084066 bp

Protein-coding Genes

5091 genes

Non-Coding Genes

227 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribose 5-phosphate isomeraseAO240_02590Not AvailablePositive296059 - 29673023234.1
dna-binding proteinAO240_02595Not AvailableNegative296767 - 29767233875.6
dna-binding proteinAO240_02600Not AvailableNegative297792 - 29871534322.2
hypothetical proteinAO240_02605Not AvailableNegative298992 - 29965723509.3
fad-linked oxidaseAO240_02610Not AvailableNegative299681 - 30107551236.2
3-phosphoglycerate dehydrogenaseAO240_02615Not AvailablePositive301280 - 30250944303.4
atpaseAO240_02620Not AvailableNegative302671 - 30311115319.7
abc transporter substrate-binding proteinAO240_02625Not AvailablePositive303245 - 30374818741.4
purine nucleoside phosphorylaseAO240_02630Not AvailableNegative303930 - 30441216864.3
2og-fe(ii) oxygenaseAO240_02635Not AvailableNegative304415 - 30504723756.5

Displaying genes 491 – 500 of 5318 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.