Pseudoalteromonas sp. P1-9

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Pseudoalteromonadaceae

Genus

Pseudoalteromonas

Description

Pseudoalteromonas sp. P1-9 is characterized as a rod-shaped bacterium, which is a defining trait for many members of the Pseudoalteromonas genus. This organism possesses a single replicon, indicating that it has a single circular chromosome, which is a common feature among many prokaryotes. The strain is cataloged under the accession number LKBD00000000.1, which is essential for researchers seeking to access its genomic data or related studies. This accession number allows for easy retrieval of the strain's genetic information, facilitating further research and potential applications. In terms of ecological significance, members of the Pseudoalteromonas genus are often found in marine environments and are known for their role in various biogeochemical processes. They can produce a range of bioactive compounds, which may have implications in natural marine ecosystems as well as in biotechnology. The presence of Pseudoalteromonas sp. P1-9 in marine habitats suggests potential contributions to microbial diversity and ecological functions, particularly in nutrient cycling and interactions with other marine organisms. Understanding the specific traits and functions of P1-9 can help elucidate its role within its ecological niche.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyPseudoalteromonadaceae
GenusPseudoalteromonas
SpeciesPseudoalteromonas sp. P1-9
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudoalteromonas sp. P1-9


Gene Summary

Adenine Count

1431876 bp

Thymine Count

1419569 bp

Guanine Count

978284 bp

Cytosine Count

978322 bp

Genome Length

4808051 bp

Protein-coding Genes

4321 genes

Non-Coding Genes

97 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s ribosomal rnaNot AvailableNot AvailablePositive20 - 2556Not Available
16s ribosomal rnaNot AvailableNot AvailablePositive53 - 1573Not Available
hypothetical proteinAN214_00001Not AvailablePositive67 - 234986793.7
5s ribosomal rnaNot AvailableNot AvailablePositive166 - 279Not Available
hlyd family secretion proteinAN214_00002Not AvailablePositive2610 - 386645915.8
macrolide export atp-binding/permease protein macbAN214_00003Not AvailablePositive3877 - 461726644.7
macrolide export atp-binding/permease protein macbAN214_00004Not AvailablePositive4614 - 704690536.4
alginate biosynthesis transcriptional regulatory protein algbAN214_00005Q06065Positive7293 - 861848899.7
nitrogen regulation protein nr(ii)AN214_00006Q1RJB3Positive8618 - 988347557.2
l-2,4-diaminobutyrate decarboxylaseAN214_00007Q43908Positive10102 - 1167358402.5

Displaying genes 1 – 10 of 4418 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

209 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000217alpha-ribazoleC14H18N2O4Chemical structure of alpha-ribazoleNot available
Average278.3037Da
Monoisotopic278.126657074Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000642S-adenosyl-4-methylsulfanyl-2-oxobutanoateC15H19N5O6SChemical structure of S-adenosyl-4-methylsulfanyl-2-oxobutanoateNot available
Average397.406Da
Monoisotopic397.105604055Da
BASm00007052-dehydro-3-deoxy-D-arabinonateC5H7O5Chemical structure of 2-dehydro-3-deoxy-D-arabinonateNot available
Average147.107Da
Monoisotopic147.0298969Da

Displaying 1–10 of 209 metabolites

Health Effects

No health effects information available for this bacterium.