Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus marincola |
| Strain | HL-49 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1101299 bp
Thymine Count
1097230 bp
Guanine Count
800946 bp
Cytosine Count
801107 bp
Genome Length
3800660 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | HLUCCX10_11920 | Not Available | Positive | 2555915 - 2556295 | 14243.1 |
| tetr family transcriptional regulator of rnd-type efflux system | HLUCCX10_11925 | Not Available | Positive | 2556399 - 2557079 | 26137.3 |
| rnd-type efflux system permease component | HLUCCX10_11930 | Q1RJ91 | Positive | 2557069 - 2558772 | 63545.4 |
| rnd-type efflux system mfs component | HLUCCX10_11935 | Not Available | Positive | 2558775 - 2560127 | 50986.1 |
| rnd-type efflux system secretin component | HLUCCX10_11940 | Not Available | Positive | 2560127 - 2561515 | 52757.1 |
| protein of unknown function duf1330 in rnd-type efflux system operon | HLUCCX10_11945 | Not Available | Positive | 2561529 - 2561813 | 10854.8 |
| hypothetical protein | HLUCCX10_11950 | Not Available | Positive | 2561969 - 2562586 | 22322.8 |
| 2-dehydro-3-deoxygluconokinase kdgk | HLUCCX10_11955 | D4GR05 | Positive | 2562721 - 2563713 | 36268.9 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase eda | HLUCCX10_11960 | Not Available | Positive | 2563714 - 2564382 | 24266.7 |
| hypothetical protein | HLUCCX10_11965 | Not Available | Positive | 2564596 - 2564733 | 5458.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
