Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Cyclobacteriaceae
Genus
Algoriphagus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Cyclobacteriaceae |
| Genus | Algoriphagus |
| Species | Algoriphagus marincola |
| Strain | HL-49 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1101299 bp
Thymine Count
1097230 bp
Guanine Count
800946 bp
Cytosine Count
801107 bp
Genome Length
3800660 bp
Protein-coding Genes
3514 genes
Non-Coding Genes
37 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd-type efflux system mfp component | HLUCCX10_11160 | Not Available | Negative | 2389313 - 2390632 | 47699.7 |
| type i secretion system secretin component tolc | HLUCCX10_11165 | Not Available | Negative | 2390636 - 2391976 | 49314.3 |
| l-serine dehydratase, iron-sulfur-dependent beta subunit sdaab | HLUCCX10_11170 | O34635 | Negative | 2392070 - 2392747 | 24337.3 |
| 4-amino-4-deoxychorismate lyase pabc | HLUCCX10_11175 | Q9KQI0 | Positive | 2392912 - 2393733 | 30620.5 |
| na+:xylose symporter xylt | HLUCCX10_11180 | P96169 | Positive | 2393846 - 2395489 | 59413.9 |
| xylulokinase xylb | HLUCCX10_11185 | P09099 | Positive | 2395490 - 2396992 | 54811.8 |
| xylose isomerase xyla | HLUCCX10_11190 | Q8A9M2 | Positive | 2397025 - 2398338 | 49526.1 |
| ce1 family carbohydrate esterase | HLUCCX10_11195 | Not Available | Negative | 2398386 - 2399447 | 39974.1 |
| hypothetical protein | HLUCCX10_11200 | Not Available | Negative | 2399449 - 2400003 | 20632.3 |
| hypothetical protein | HLUCCX10_11205 | Not Available | Positive | 2400158 - 2400730 | 21293.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
