Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-6-phosphate 1-dehydrogenase | ALO56_02132 | O68282 | Positive | 1143776 - 1145245 | 55397.2 |
| 6-phosphogluconolactonase | ALO56_02133 | Q9EV79 | Positive | 1145232 - 1145945 | 25119.3 |
| keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase | ALO56_02134 | P00885 | Positive | 1145963 - 1146634 | 23723.8 |
| putative cytoplasmic protein | ALO56_100247 | P0AD41 | Negative | 1147068 - 1147388 | 12057.8 |
| uncharacterized protein | ALO56_02135 | Not Available | Positive | 1147529 - 1147999 | 16994.9 |
| heavy metal sensor histidine kinase | ALO56_04820 | P77485 | Negative | 1149792 - 1151306 | 55806.9 |
| dna-binding heavy metal response regulator | ALO56_02137 | Not Available | Negative | 1151146 - 1151823 | 25163.5 |
| acrb/acrd/acrf family protein | ALO56_04822 | B7MWY8 | Negative | 1151834 - 1154935 | 110616.0 |
| secretion protein hlyd | ALO56_02139 | B7ME86 | Negative | 1154932 - 1156098 | 41820.2 |
| uncharacterized protein | ALO56_02140 | Not Available | Positive | 1156376 - 1156762 | 12919.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









