Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphogluconate dehydratase | ALO56_02122 | P31961 | Positive | 1130603 - 1132429 | 65444.2 |
| dna-binding response regulator gltr | ALO56_02123 | G3XCY6 | Positive | 1133440 - 1134177 | 27476.9 |
| sensor histidine kinase | ALO56_02124 | Not Available | Positive | 1134185 - 1135645 | 54305.0 |
| glucose abc transporter, periplasmic glucose-binding protein | ALO56_02125 | Q92KZ7 | Positive | 1135775 - 1137061 | 45612.2 |
| glucose abc transporter permease | ALO56_02126 | O58968 | Positive | 1137166 - 1138074 | 33755.1 |
| binding-protein dependent transport system inner membrane protein | ALO56_02127 | O58967 | Positive | 1138067 - 1138912 | 30585.2 |
| glucose abc transporter atp-binding protein | ALO56_02128 | O32151 | Positive | 1138915 - 1140075 | 42192.4 |
| porin | ALO56_02129 | Q51485 | Positive | 1140203 - 1141564 | 50747.2 |
| aldose 1-epimerase | ALO56_02130 | P39173 | Positive | 1141690 - 1142565 | 32559.0 |
| dna-binding transcriptional regulator hexr | ALO56_04819 | Q88P32 | Negative | 1142691 - 1143557 | 31422.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









