Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrite/sulfite reductase, hemoprotein beta-component | ALO56_04489 | Q73XV0 | Negative | 1119303 - 1121024 | 64808.1 |
| hypothetical protein | ALO56_00717 | Not Available | Positive | 1121284 - 1121397 | 4013.95 |
| periplasmic sugar-binding domain protein | ALO56_101011 | Not Available | Positive | 1121413 - 1122597 | 43466.0 |
| aldehyde dehydrogenase family protein | ALO56_101097 | P71016 | Positive | 1123179 - 1124228 | 36882.1 |
| peptidase m20d, amidohydrolase | ALO56_01706 | P45493 | Positive | 1124234 - 1125391 | 41528.9 |
| l-serine dehydratase 1 | ALO56_01707 | O86564 | Negative | 1125558 - 1126937 | 49129.1 |
| lysr family transcriptional regulator | ALO56_01708 | Not Available | Positive | 1127062 - 1127967 | 33907.9 |
| uncharacterized protein | ALO56_02119 | Not Available | Negative | 1128271 - 1128627 | 13425.7 |
| uncharacterized protein | ALO56_02120 | Not Available | Negative | 1128709 - 1129215 | 19024.7 |
| glyceraldehyde-3-phosphate dehydrogenase | ALO56_02121 | P27726 | Negative | 1129382 - 1130398 | 36826.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









