Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium-transporting atpase c chain | ALO56_100424 | Q883V4 | Negative | 1077866 - 1078489 | 21583.0 |
| potassium-transporting atpase b chain | ALO56_01358 | P57698 | Negative | 1078498 - 1080564 | 72728.4 |
| potassium-transporting atpase a chain | ALO56_01359 | Q883V6 | Negative | 1080575 - 1082269 | 60206.3 |
| uncharacterized protein | ALO56_01360 | Not Available | Negative | 1082278 - 1082394 | 4191.29 |
| regulatory protein luxr | ALO56_01361 | P25084 | Positive | 1082637 - 1082879 | 9155.09 |
| yd repeat-containing protein | ALO56_01362 | Not Available | Negative | 1082966 - 1086817 | 144635.0 |
| uncharacterized protein | ALO56_01363 | Not Available | Negative | 1087428 - 1090355 | 106280.0 |
| uncharacterized protein | ALO56_01364 | Not Available | Negative | 1090359 - 1092743 | 85345.4 |
| uncharacterized protein | ALO56_01365 | Not Available | Negative | 1092844 - 1097562 | 170830.0 |
| uncharacterized protein | ALO56_01366 | Not Available | Negative | 1097598 - 1099394 | 65282.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









