Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_04892 | Not Available | Negative | 1060604 - 1060927 | 11770.6 |
| lipopolysaccharide kinase | ALO56_02579 | P27294 | Negative | 1060828 - 1061547 | 27387.5 |
| uncharacterized protein | ALO56_02580 | Not Available | Negative | 1061552 - 1062232 | 26521.9 |
| sensor histidine kinase | ALO56_04893 | Q44930 | Negative | 1062417 - 1063739 | 49245.9 |
| response regulator receiver:transcriptional regulatory protein, c-terminal | ALO56_02582 | I1WSZ4 | Negative | 1063696 - 1064379 | 25533.0 |
| pap2 superfamily protein | ALO56_02583 | Not Available | Positive | 1064562 - 1065290 | 27082.6 |
| hypothetical protein | ALO56_200077 | P24177 | Negative | 1065392 - 1065847 | 15817.7 |
| amino acid adenylation | ALO56_04697 | P0DUV3 | Negative | 1065851 - 1074054 | 300354.0 |
| response regulator receiver:transcriptional regulatory protein, c-terminal | ALO56_01356 | P21866 | Negative | 1074110 - 1074802 | 25442.6 |
| sensor protein kdpd | ALO56_04617 | P21865 | Negative | 1074858 - 1077533 | 97000.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









