Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02570 | Not Available | Positive | 1043182 - 1043895 | 27464.1 |
| lipoprotein | ALO56_02571 | Not Available | Positive | 1043999 - 1045426 | 51484.6 |
| lipoprotein | ALO56_02572 | Not Available | Positive | 1045461 - 1046525 | 38534.0 |
| putative exported protein | ALO56_100638 | Not Available | Positive | 1046452 - 1047639 | 43734.2 |
| uncharacterized protein | ALO56_02573 | Not Available | Negative | 1047636 - 1052573 | 184790.0 |
| uncharacterized protein | ALO56_02574 | P72929 | Negative | 1052646 - 1054694 | 75238.0 |
| uncharacterized protein | ALO56_02575 | Not Available | Negative | 1054717 - 1055358 | 23029.5 |
| phage shock protein a, pspa | ALO56_02576 | Not Available | Negative | 1055376 - 1056074 | 25425.0 |
| putative rnd efflux membrane fusion protein | ALO56_02577 | Q57500 | Positive | 1056328 - 1057482 | 40909.3 |
| multidrug efflux protein | ALO56_02578 | Q57124 | Positive | 1057496 - 1060555 | 111163.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









