Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02560 | Not Available | Negative | 1029095 - 1029754 | 22725.4 |
| uncharacterized protein | ALO56_02561 | Not Available | Negative | 1029902 - 1030759 | 31256.7 |
| 3-beta hydroxysteroid dehydrogenase/isomerase | ALO56_02562 | Q8PDW5 | Negative | 1030839 - 1031831 | 36830.5 |
| chromosome replication initiation inhibitor protein | ALO56_04889 | Q3K7N4 | Negative | 1031908 - 1032903 | 36355.0 |
| lyse family transporter | ALO56_04890 | P70775 | Positive | 1032806 - 1033504 | 24577.5 |
| superoxide dismutase | ALO56_02565 | Q88PD5 | Positive | 1033698 - 1034279 | 21505.0 |
| ggdef domain/eal domain protein | ALO56_02566 | Not Available | Positive | 1034665 - 1036716 | 77134.9 |
| iron-regulated protein a | ALO56_04891 | Not Available | Positive | 1036911 - 1038269 | 47206.9 |
| uncharacterized protein | ALO56_02568 | Not Available | Positive | 1038469 - 1039353 | 34066.6 |
| uncharacterized protein | ALO56_02569 | Not Available | Positive | 1039350 - 1042829 | 130654.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









