Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type vi secretion system effector, hcp1 family | ALO56_100329 | Not Available | Positive | 1005287 - 1005775 | 17531.6 |
| uncharacterized protein | ALO56_02543 | Not Available | Positive | 1006331 - 1006771 | 16269.5 |
| uncharacterized protein | ALO56_02544 | Not Available | Negative | 1006948 - 1007595 | 23367.1 |
| protein hscc | ALO56_02545 | Not Available | Positive | 1007834 - 1008034 | 7322.57 |
| uncharacterized protein | ALO56_02546 | Not Available | Positive | 1008031 - 1009731 | 65236.0 |
| uncharacterized protein | ALO56_02547 | Not Available | Positive | 1009728 - 1010681 | 35101.9 |
| uncharacterized protein | ALO56_02548 | Not Available | Positive | 1013340 - 1014689 | 51098.9 |
| transposase component | ALO56_02549 | P50360 | Positive | 1015945 - 1016562 | 23053.9 |
| translocator protein, lyse family | ALO56_100820 | A4WB82 | Negative | 1016598 - 1017236 | 23003.8 |
| uncharacterized protein | ALO56_02550 | Not Available | Positive | 1020068 - 1020310 | 8753.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









