Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_02533 | Not Available | Positive | 994212 - 995423 | 45756.7 |
| atpase | ALO56_02534 | Not Available | Positive | 995420 - 996475 | 38340.6 |
| uncharacterized protein | ALO56_02535 | Not Available | Positive | 996472 - 997815 | 50413.8 |
| uncharacterized protein | ALO56_02536 | Not Available | Negative | 997840 - 998085 | 9162.05 |
| lipoprotein | ALO56_02537 | Not Available | Negative | 998391 - 998765 | 14207.1 |
| pyruvate kinase | ALO56_02538 | P21599 | Positive | 998936 - 1000393 | 52347.2 |
| uncharacterized protein | ALO56_02539 | Q9L6L9 | Negative | 1000609 - 1001550 | 34743.1 |
| fumarate hydratase | ALO56_02540 | P40720 | Positive | 1001727 - 1003250 | 54812.4 |
| secreted mannuronan c-5 epimerase | ALO56_02541 | Q44492 | Negative | 1003336 - 1004028 | 24992.5 |
| protein psme | ALO56_02542 | Q9ZFG9 | Negative | 1004202 - 1004678 | 16639.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









