Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphate transporter | ALO56_100081 | P0AFJ9 | Positive | 982165 - 983793 | 58561.0 |
| uncharacterized protein | ALO56_05257 | P39342 | Negative | 983845 - 985332 | 53331.1 |
| glycosyl transferase | ALO56_02525 | A0R2E2 | Positive | 985533 - 986645 | 40394.1 |
| uncharacterized protein | ALO56_02526 | Not Available | Positive | 986638 - 987423 | 30631.6 |
| formyltetrahydrofolate deformylase | ALO56_02527 | Q55135 | Negative | 987653 - 988504 | 32562.9 |
| transcriptional regulator | ALO56_02528 | Not Available | Positive | 988863 - 989243 | 14195.0 |
| exodeoxyribonuclease i | ALO56_04886 | P04995 | Negative | 989327 - 990859 | 58200.2 |
| rdd domain-containing protein | ALO56_02530 | Not Available | Positive | 990937 - 991662 | 25945.0 |
| uncharacterized protein | ALO56_02531 | Not Available | Positive | 991659 - 992639 | 36104.0 |
| uncharacterized protein | ALO56_02532 | Not Available | Positive | 992626 - 994215 | 60312.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









