Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | ALO56_04883 | Q9AIU0 | Negative | 969037 - 969723 | 26059.2 |
| secretion protein hlyd | ALO56_04884 | Q9KJC3 | Positive | 969909 - 970640 | 26744.9 |
| secretion protein hlyd | ALO56_02516 | P0C069 | Positive | 970505 - 971098 | 21023.9 |
| acriflavine resistance protein b | ALO56_02517 | P0C070 | Positive | 971102 - 974257 | 113136.0 |
| citrate-proton symport | ALO56_04885 | Not Available | Negative | 975793 - 977139 | 49031.4 |
| beta-ketoadipyl coa thiolase | ALO56_02519 | Q51956 | Negative | 977236 - 978438 | 41771.4 |
| 3-oxoadipate:succinyl-coa transferase subunit b | ALO56_02520 | Q8VPF2 | Negative | 978438 - 979217 | 27121.3 |
| 3-oxoadipate:succinyl-coa transferase subunit a | ALO56_02521 | Q8VPF3 | Negative | 979217 - 980104 | 32139.7 |
| pca regulon regulatory protein pcar | ALO56_02522 | Q52154 | Negative | 980231 - 981145 | 33241.1 |
| uncharacterized protein | ALO56_02523 | Not Available | Positive | 981863 - 982117 | 9912.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









