Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | ALO56_02504 | Not Available | Positive | 954810 - 956147 | 49827.3 |
| sensory box histidine kinase/response regulator | ALO56_02505 | Not Available | Positive | 956452 - 958749 | 84035.2 |
| chaperone protein hscc | ALO56_02506 | P77319 | Positive | 958835 - 960529 | 62692.9 |
| dnaj domain-containing protein | ALO56_02507 | Not Available | Positive | 960526 - 962175 | 62941.4 |
| major facilitator transporter | ALO56_02508 | P0AEX3 | Positive | 962356 - 963681 | 48409.9 |
| uncharacterized protein | ALO56_02509 | Not Available | Positive | 964617 - 965240 | 22390.8 |
| uncharacterized protein | ALO56_02510 | Not Available | Negative | 965250 - 965495 | 8662.25 |
| uncharacterized protein | ALO56_02511 | Not Available | Positive | 965628 - 965798 | 5940.32 |
| emrb/qaca family drug resistance transporter | ALO56_02512 | P9WG84 | Positive | 965929 - 967425 | 52986.6 |
| uncharacterized protein | ALO56_04882 | Not Available | Negative | 967450 - 968586 | 42890.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









