Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mandelate racemase/muconate lactonizing protein | ALO56_04877 | Q89FH0 | Negative | 931471 - 932694 | 45320.0 |
| lysr family transcriptional regulator | ALO56_02485 | P39376 | Positive | 932748 - 933632 | 32518.9 |
| had family hydrolase | ALO56_02486 | Q9I6F6 | Negative | 933809 - 934462 | 24234.0 |
| na+/solute symporter | ALO56_02487 | Not Available | Negative | 934525 - 936054 | 54736.9 |
| uncharacterized protein | ALO56_02488 | Not Available | Negative | 936051 - 936308 | 9297.65 |
| choline/ethanolamine kinase:aminoglycoside phosphotransferase | ALO56_02489 | Not Available | Negative | 936425 - 937360 | 35481.9 |
| aminoglycoside phosphotransferase | ALO56_02490 | Not Available | Negative | 937357 - 938313 | 35656.3 |
| allantoate amidohydrolase | ALO56_02491 | A0QZE3 | Negative | 938323 - 939603 | 45778.9 |
| deor family transcriptional regulator | ALO56_02492 | P52598 | Negative | 939581 - 940339 | 28302.3 |
| amidase | ALO56_02493 | O28325 | Negative | 940423 - 941850 | 50553.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









