Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| unknown protein sequence | ALO56_02474 | Not Available | Negative | 916237 - 916383 | 5722.92 |
| hypothetical protein | ALO56_02475 | Not Available | Positive | 916777 - 917022 | 8701.8 |
| uncharacterized protein | ALO56_02476 | Not Available | Positive | 917086 - 918492 | 54001.8 |
| uncharacterized protein | ALO56_02477 | P21325 | Negative | 918708 - 920504 | 67323.5 |
| lipoprotein | ALO56_02478 | Not Available | Negative | 923618 - 924124 | 18420.1 |
| autotransporter | ALO56_02479 | Not Available | Positive | 924405 - 927437 | 104371.0 |
| uncharacterized protein | ALO56_02480 | P51716 | Positive | 928009 - 928419 | 14881.4 |
| xena | ALO56_02481 | Q5KXG9 | Negative | 928546 - 929637 | 39707.9 |
| arsr family transcriptional regulator | ALO56_02482 | Not Available | Positive | 929715 - 930026 | 11477.9 |
| sodium:dicarboxylate symporter | ALO56_02483 | B8J708 | Negative | 930077 - 931393 | 46208.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









