Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ALO56_02465 | Not Available | Positive | 901076 - 901801 | 26691.8 |
| uncharacterized protein | ALO56_02466 | O31473 | Positive | 901815 - 902438 | 22927.2 |
| urea amidolyase-related protein | ALO56_02467 | P32528 | Positive | 902559 - 906188 | 130666.0 |
| allophanate hydrolase | ALO56_02468 | Q936X2 | Positive | 906220 - 908028 | 64135.7 |
| uncharacterized protein | ALO56_02469 | Not Available | Positive | 908123 - 911368 | 120331.0 |
| uncharacterized protein | ALO56_02470 | Not Available | Positive | 911404 - 911625 | 7801.29 |
| pseudouridine synthase | ALO56_02471 | Q9I5J6 | Positive | 911671 - 912363 | 26606.1 |
| 3-hydroxyacyl-coa-acp transferase | ALO56_02472 | Not Available | Positive | 912663 - 913556 | 33549.9 |
| Trna-gly | Not Available | Not Available | Positive | 913809 - 913882 | Not Available |
| uncharacterized protein | ALO56_02473 | Not Available | Negative | 914488 - 916149 | 63427.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









