Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_05254 | Not Available | Negative | 887870 - 888787 | 33857.6 |
| tricarboxylate transport sensor protein tcte | ALO56_101426 | Not Available | Negative | 889114 - 889871 | 28350.3 |
| dna-binding response regulator tctd | ALO56_01032 | E1WA34 | Negative | 889834 - 890505 | 24614.8 |
| tricarboxylate transport protein tctc | ALO56_01033 | Not Available | Positive | 890997 - 891974 | 35147.4 |
| membrane protein tctb | ALO56_01034 | Not Available | Positive | 892037 - 892495 | 16590.4 |
| membrane protein tcta | ALO56_01035 | P70795 | Positive | 892498 - 894012 | 53113.1 |
| enoyl-coa hydratase/isomerase | ALO56_01036 | Not Available | Positive | 895905 - 897017 | 40847.1 |
| abc transporter substrate-binding protein | ALO56_02462 | Not Available | Positive | 898384 - 899457 | 38045.4 |
| abc transporter permease | ALO56_02463 | Q57856 | Positive | 899485 - 900300 | 29857.0 |
| abc transporter atp-binding protein | ALO56_02464 | Q88CL2 | Positive | 900297 - 901079 | 28933.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









