Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dienelactone hydrolase-like enzyme | ALO56_01647 | Not Available | Negative | 878277 - 879458 | 42353.8 |
| glutathione s-transferase domain-containing protein | ALO56_01648 | P15214 | Negative | 879517 - 880185 | 25066.1 |
| cro/ci family transcriptional regulator | ALO56_01649 | Q06553 | Negative | 880601 - 881338 | 27783.3 |
| uncharacterized protein | ALO56_01650 | Q8E9K5 | Positive | 881892 - 882230 | 12967.7 |
| inorganic pyrophosphatase | ALO56_01651 | Q889M7 | Negative | 882322 - 882849 | 19359.1 |
| uncharacterized protein | ALO56_01652 | B2VFG2 | Negative | 882959 - 883771 | 30827.9 |
| uncharacterized protein | ALO56_01653 | P0ABP7 | Negative | 883775 - 884422 | 23687.8 |
| acetyltransferase | ALO56_01654 | O07614 | Negative | 884613 - 885074 | 18005.7 |
| ethanolamine ammonia-lyase light chain | ALO56_01655 | Q889M3 | Negative | 885160 - 886038 | 31731.8 |
| ethanolamine ammonia lyase large subunit | ALO56_01656 | P0AEJ7 | Negative | 886035 - 887429 | 50242.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









