Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein lysr | ALO56_05164 | P0A9G2 | Positive | 10697 - 11599 | 33176.1 |
| major facilitator family transporter | ALO56_04007 | A6T8Y8 | Negative | 11596 - 12750 | 39995.8 |
| uncharacterized protein | ALO56_04008 | Not Available | Negative | 12902 - 13438 | 19840.0 |
| hypothetical protein | ALO56_04009 | Q882E2 | Positive | 13556 - 14224 | 24637.4 |
| homoserine kinase | ALO56_02707 | B7V732 | Negative | 14392 - 15342 | 35435.6 |
| hypothetical protein | ALO56_101431 | Not Available | Negative | 15377 - 15667 | 10807.1 |
| dna polymerase i | ALO56_02708 | Q9HT80 | Positive | 15739 - 18504 | 100734.0 |
| putative gtp-binding protein engb | ALO56_02709 | Q48PV6 | Negative | 18749 - 19384 | 23538.6 |
| cytochrome c4 | ALO56_02710 | P00106 | Positive | 19737 - 20351 | 21430.6 |
| thiol:disulfide interchange protein | ALO56_02711 | O52376 | Positive | 20517 - 21164 | 23290.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









