Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01630 | Not Available | Negative | 858361 - 858948 | 21201.9 |
| uncharacterized protein | ALO56_01631 | Not Available | Positive | 859697 - 860050 | 12456.9 |
| thioredoxin | ALO56_01632 | P77395 | Negative | 860108 - 860980 | 32182.6 |
| uncharacterized protein | ALO56_01633 | Not Available | Negative | 861253 - 861909 | 24174.8 |
| lipoprotein | ALO56_01634 | Not Available | Negative | 861906 - 862358 | 16113.8 |
| transcriptional repressor nrdr | ALO56_01635 | Q889R0 | Positive | 862503 - 863000 | 18938.1 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | ALO56_100038 | Not Available | Positive | 862997 - 864142 | 40411.1 |
| riboflavin synthase subunit alpha | ALO56_01636 | P51961 | Positive | 864190 - 864852 | 23551.1 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | ALO56_01637 | Q9HWX4 | Positive | 864874 - 865965 | 39553.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | ALO56_01638 | Q889Q6 | Positive | 866095 - 866571 | 16521.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









