Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carboxymuconolactone decarboxylase | ALO56_00811 | P20370 | Positive | 847693 - 848076 | 13918.5 |
| auxin efflux carrier | ALO56_00812 | Not Available | Negative | 848090 - 849040 | 33721.4 |
| alkaline phosphatase | ALO56_04513 | Q8KRU5 | Negative | 849126 - 850724 | 59924.0 |
| amino acid adenylation | ALO56_04739 | Not Available | Negative | 850905 - 853210 | 86840.8 |
| pyoverdine sidechain peptide synthetase ii, d-asp-l-thr component | ALO56_01862 | P0DUV4 | Negative | 853424 - 854164 | 27371.8 |
| uncharacterized protein | ALO56_01625 | Not Available | Positive | 854455 - 854934 | 17815.4 |
| ompw family protein | ALO56_01626 | P17266 | Negative | 854991 - 855677 | 24425.2 |
| lipoprotein | ALO56_01627 | Not Available | Negative | 855782 - 856303 | 19004.2 |
| permease | ALO56_01628 | Not Available | Negative | 856315 - 857580 | 46301.7 |
| abc transporter atp-binding protein | ALO56_01629 | P9WQK0 | Negative | 857582 - 858304 | 26349.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









