Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic axial filament protein | ALO56_00801 | P0A9J2 | Negative | 837661 - 839118 | 54694.3 |
| maf-like protein | ALO56_00802 | Q4ZNT2 | Negative | 839115 - 839717 | 21113.2 |
| rod shape-determining protein mred | ALO56_00803 | Not Available | Negative | 839781 - 840272 | 18482.7 |
| rod shape-determining protein mrec | ALO56_00804 | P44475 | Negative | 840265 - 841407 | 40768.3 |
| rod shape-determining protein mreb | ALO56_04512 | P0A9X5 | Negative | 841562 - 842599 | 37005.8 |
| aspartyl/glutamyl-trna amidotransferase subunit c | ALO56_00806 | Q48E93 | Positive | 842805 - 843092 | 10475.5 |
| glutamyl-trna amidotransferase subunit a | ALO56_00807 | Q4ZNS7 | Positive | 843107 - 844558 | 51937.9 |
| aspartyl/glutamyl-trna amidotransferase subunit b | ALO56_00808 | Q48E91 | Positive | 844569 - 846014 | 53087.4 |
| rpla family protein | ALO56_00809 | Q55752 | Positive | 846197 - 846568 | 13473.0 |
| k+-dependent na+/ca+ exchanger-like protein | ALO56_00810 | Q0ZAI3 | Positive | 846622 - 847653 | 36112.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









