Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| morn repeat-containing protein | ALO56_04286 | Not Available | Positive | 822378 - 824105 | 62077.2 |
| nucleoside-diphosphate-sugar epimerase | ALO56_04287 | P45469 | Positive | 824133 - 824774 | 23326.3 |
| lipoprotein | ALO56_04288 | Not Available | Negative | 824933 - 825229 | 9889.3 |
| aromatic acid decarboxylase | ALO56_04289 | Q9HX08 | Negative | 825210 - 825839 | 22633.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | ALO56_04290 | P37773 | Negative | 825836 - 827191 | 48537.1 |
| aldehyde dehydrogenase | ALO56_04291 | Q9ZAA1 | Positive | 827412 - 828932 | 54880.7 |
| pmba protein | ALO56_00797 | P0AFK1 | Negative | 829308 - 830669 | 48623.5 |
| uncharacterized protein | ALO56_00798 | Q87WS9 | Positive | 830762 - 831283 | 20097.1 |
| c69 family peptidase | ALO56_04507 | P0AGG9 | Negative | 831329 - 832774 | 50515.0 |
| uncharacterized protein | ALO56_04510 | Not Available | Negative | 833665 - 837528 | 138812.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









