Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal rna large subunit methyltransferase h | ALO56_04279 | Q87VV9 | Negative | 814568 - 815035 | 17728.7 |
| ribosomal silencing factor rsfs | ALO56_04280 | Q02SH2 | Negative | 815045 - 815431 | 13831.4 |
| putative nicotinate-nucleotide adenylyltransferase | ALO56_04281 | Q87VV7 | Negative | 815495 - 816175 | 24930.9 |
| gamma-glutamyl phosphate reductase | ALO56_100009 | Q4ZN73 | Negative | 816177 - 817280 | 39217.3 |
| putative 3-methyladenine dna glycosylase | ALO56_100327 | Q48DL2 | Positive | 817600 - 818385 | 29495.4 |
| pap2 superfamily protein/deda family protein | ALO56_04282 | P30149 | Positive | 818389 - 819705 | 47084.0 |
| atp-dependent protease la | ALO56_04283 | Not Available | Negative | 819902 - 820492 | 21493.7 |
| lrgb-like protein | ALO56_05231 | P42102 | Negative | 820504 - 821187 | 23553.9 |
| lrga family protein | ALO56_04284 | Not Available | Negative | 821217 - 821579 | 13265.0 |
| maoc-like domain protein | ALO56_04285 | Q7U2S5 | Positive | 821784 - 822239 | 16797.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









