Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase b precursor | ALO56_100203 | Not Available | Positive | 804514 - 805854 | 48164.8 |
| lipoyl synthase | ALO56_04271 | Q48DM6 | Negative | 806029 - 807036 | 37642.8 |
| octanoyltransferase | ALO56_04272 | Q87VW6 | Negative | 807029 - 807685 | 23793.4 |
| uncharacterized protein | ALO56_04273 | Q4ZN82 | Negative | 807685 - 807996 | 11223.5 |
| serine-type d-ala-d-ala carboxypeptidase | ALO56_04274 | P08506 | Negative | 808055 - 809215 | 42347.0 |
| hypothetical protein | ALO56_100881 | Not Available | Positive | 809235 - 809489 | 9056.9 |
| rare lipoprotein a | ALO56_04275 | Q9X6V6 | Negative | 809459 - 810484 | 36732.7 |
| lytic murein transglycosylase b | ALO56_04276 | P41052 | Negative | 810484 - 811491 | 37482.5 |
| rod shape-determining protein roda | ALO56_04277 | P0ABG8 | Negative | 811509 - 812654 | 41770.7 |
| penicillin-binding protein 2 | ALO56_04278 | P44469 | Negative | 812644 - 814539 | 70273.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









