Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii and iii secretion system protein | ALO56_00987 | P34750 | Negative | 795323 - 797452 | 76569.6 |
| type iv pilus bioproteinsis protein pilp | ALO56_00988 | G3XCX7 | Negative | 797470 - 797997 | 18898.5 |
| type iv pilus bioproteinsis protein pilo | ALO56_00989 | G3XD51 | Negative | 797994 - 798617 | 23119.0 |
| type 4 fimbrial bioproteinsis protein piln | ALO56_00990 | G3XD30 | Negative | 798614 - 798772 | 5607.59 |
| hypothetical protein | ALO56_200016 | Not Available | Positive | 799034 - 799177 | 5076.2 |
| hypothetical protein | ALO56_101453 | Not Available | Negative | 799267 - 799680 | 15008.2 |
| hypothetical protein | ALO56_101221 | Not Available | Negative | 799673 - 801031 | 47613.5 |
| precorrin-6y c5,15-methyltransferase | ALO56_04268 | Q9HZU0 | Positive | 801152 - 802354 | 42799.6 |
| putative cobalt-precorrin-6a synthase | ALO56_04269 | Q48DG3 | Positive | 802354 - 803466 | 38686.8 |
| uncharacterized protein | ALO56_04270 | Not Available | Positive | 804287 - 804442 | 5733.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









