Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein-glutamate methylesterase cheb | ALO56_101278 | P62642 | Negative | 767776 - 768393 | 22153.5 |
| chemotaxis protein methyltransferase cher | ALO56_03990 | Q88GG4 | Negative | 768387 - 769208 | 31516.7 |
| response regulator receiver | ALO56_05158 | P0C0F6 | Negative | 769255 - 772761 | 131161.0 |
| response regulator | ALO56_03992 | Not Available | Positive | 773093 - 773458 | 13440.2 |
| glycosyltransferase | ALO56_03993 | Not Available | Positive | 773445 - 774776 | 49651.4 |
| bro domain-containing protein | ALO56_03994 | Not Available | Positive | 775101 - 775742 | 24844.8 |
| precorrin 6a synthase | ALO56_03995 | P21636 | Negative | 775764 - 776561 | 30103.0 |
| transcriptional activator mltr | ALO56_03996 | Not Available | Positive | 776628 - 777578 | 36305.3 |
| mannitol abc transporter, periplasmic mannitol-binding protein | ALO56_03997 | Q9I1E0 | Positive | 777818 - 779140 | 48161.0 |
| binding-protein dependent transport system inner membrane protein | ALO56_03998 | O32155 | Positive | 779216 - 780148 | 33876.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









