Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain/ggdef domain/eal domain-containing protein | ALO56_05163 | Not Available | Negative | 901 - 1848 | 34552.6 |
| oxidoreductase, zinc-binding protein | ALO56_100292 | Not Available | Positive | 3887 - 5119 | 44273.2 |
| uncharacterized protein | ALO56_04002 | Not Available | Positive | 5419 - 5796 | 13268.1 |
| mutt/nudix family protein | ALO56_04003 | Not Available | Positive | 5996 - 6358 | 13374.0 |
| Trna-val | Not Available | Not Available | Positive | 6493 - 6569 | Not Available |
| Trna-val | Not Available | Not Available | Positive | 6739 - 6815 | Not Available |
| gamma-glutamylputrescine oxidoreductase | ALO56_04004 | P37906 | Positive | 6999 - 8282 | 46601.0 |
| uncharacterized protein | ALO56_04005 | Not Available | Negative | 8338 - 9039 | 25500.9 |
| uncharacterized protein | ALO56_04006 | Not Available | Positive | 9255 - 9434 | 6549.2 |
| membrane protein, terc family | ALO56_100228 | P67129 | Negative | 9525 - 10283 | 27364.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









