Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| scp-2 sterol transfer family protein | ALO56_03981 | Not Available | Positive | 755804 - 756121 | 11287.5 |
| aminoglycoside phosphotransferase | ALO56_03982 | Q8K370 | Positive | 756330 - 757397 | 40712.7 |
| short chain dehydrogenase | ALO56_05155 | Q9GKX2 | Positive | 757181 - 758188 | 35636.1 |
| oxidoreductase | ALO56_03984 | B1G894 | Positive | 758298 - 759446 | 41218.9 |
| uncharacterized protein | ALO56_03985 | P29942 | Positive | 759521 - 760300 | 27107.6 |
| enoyl-coa hydratase | ALO56_05156 | O35459 | Negative | 761144 - 762007 | 31712.5 |
| kaic | ALO56_03987 | P74503 | Positive | 762174 - 763658 | 54731.9 |
| sensory box histidine kinase/response regulator | ALO56_100623 | P0DOA0 | Positive | 763655 - 765685 | 74818.3 |
| response regulator | ALO56_03988 | Not Available | Negative | 766111 - 766530 | 14967.5 |
| response regulator receiver:atp-binding region | ALO56_03989 | P0AEC7 | Negative | 766601 - 767782 | 44214.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









