Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transketolase | ALO56_05081 | Q87GY4 | Positive | 737350 - 739395 | 74245.8 |
| d-erythrose-4-phosphate dehydrogenase | ALO56_05082 | C6DFH8 | Positive | 739514 - 740578 | 39208.6 |
| phosphoglycerate kinase | ALO56_03563 | Q48CH7 | Positive | 740595 - 741758 | 40295.5 |
| lipoprotein | ALO56_03564 | Not Available | Positive | 741769 - 742020 | 9165.95 |
| uncharacterized protein | ALO56_03565 | Not Available | Positive | 742107 - 742298 | 6374.49 |
| lipoprotein | ALO56_03566 | Not Available | Positive | 742353 - 742679 | 11847.0 |
| fructose-1,6-bisphosphate aldolase | ALO56_03567 | Q9I5Y1 | Positive | 742794 - 743858 | 38632.3 |
| nonribosomal peptide synthetase | ALO56_04599 | O68008 | Positive | 743958 - 745513 | 56991.1 |
| hypothetical protein | ALO56_200091 | Not Available | Negative | 746098 - 746340 | 8799.42 |
| hypothetical protein | ALO56_200226 | O31480 | Positive | 746381 - 746683 | 11344.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









