Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cation efflux family protein | ALO56_03552 | P13510 | Negative | 726452 - 727729 | 45122.9 |
| outer membrane efflux protein | ALO56_05077 | P13509 | Negative | 727799 - 729061 | 45801.3 |
| dna-binding heavy metal response regulator | ALO56_03554 | Q44006 | Positive | 729267 - 729941 | 25810.5 |
| heavy metal sensor histidine kinase | ALO56_100550 | P0DMK6 | Positive | 729800 - 731329 | 56719.8 |
| uncharacterized protein | ALO56_03555 | Not Available | Positive | 731426 - 731827 | 14083.7 |
| uncharacterized protein | ALO56_03556 | Not Available | Negative | 732023 - 732430 | 14990.8 |
| dna ligase b | ALO56_05078 | Q4ZLZ9 | Negative | 732485 - 734218 | 63093.2 |
| spovt/abrb-like protein | ALO56_03558 | Not Available | Positive | 734411 - 734665 | 9218.27 |
| s-adenosylmethionine synthase | ALO56_05079 | Q88AK7 | Negative | 734933 - 736123 | 42585.6 |
| arsr family transcriptional regulator | ALO56_03560 | Not Available | Negative | 736144 - 737139 | 36146.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









