Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_04920 | Not Available | Positive | 713478 - 714683 | 43543.9 |
| regulatory protein, deor | ALO56_03543 | Not Available | Negative | 714892 - 715713 | 29277.4 |
| sorbitol dehydrogenase | ALO56_03544 | Q59787 | Negative | 715819 - 716592 | 27172.5 |
| mtle | ALO56_03545 | Not Available | Negative | 716626 - 717948 | 48608.9 |
| arac family transcriptional regulator | ALO56_05073 | Not Available | Positive | 718244 - 719167 | 34685.6 |
| na+/h+ antiporter nhap | ALO56_03547 | G3XD29 | Negative | 719193 - 720449 | 45145.0 |
| uncharacterized protein | ALO56_03548 | Not Available | Negative | 720754 - 721086 | 12293.0 |
| uncharacterized protein | ALO56_03549 | Not Available | Positive | 721329 - 721553 | 8247.64 |
| outer membrane porin, oprd family protein | ALO56_03550 | Not Available | Positive | 721885 - 723210 | 48654.7 |
| heavy metal efflux pump czca | ALO56_05075 | P94177 | Negative | 723275 - 726427 | 113519.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









