Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01593 | Not Available | Positive | 704483 - 705133 | 23739.6 |
| uncharacterized protein | ALO56_01594 | Not Available | Negative | 705140 - 705538 | 14601.5 |
| cobalamin synthesis protein/p47k family protein | ALO56_01595 | P33030 | Positive | 705564 - 706544 | 35477.1 |
| carbon-phosphorus lyase complex subunit | ALO56_02753 | Not Available | Negative | 706732 - 707328 | 21406.5 |
| phosphonate metabolism protein phng | ALO56_02754 | P16685 | Negative | 707328 - 707813 | 17732.0 |
| phosphonate metabolism transcriptional regulator phnf | ALO56_02755 | P16684 | Negative | 707828 - 708538 | 26785.2 |
| phosphonates abc transporter, permease protein | ALO56_100040 | A0A140NFA3 | Negative | 708570 - 709358 | 28856.7 |
| phosphonates abc transporter periplasmic phosphonates-binding protein | ALO56_02756 | P16682 | Negative | 709420 - 710427 | 36812.8 |
| phosphonates import atp-binding protein phnc | ALO56_02757 | Q4ZU82 | Negative | 710493 - 711326 | 30172.7 |
| methyl-accepting chemotaxis protein | ALO56_04919 | Q882Z2 | Negative | 711693 - 713621 | 68809.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









