Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01858 | Not Available | Positive | 690782 - 692188 | 51246.2 |
| band 7 protein | ALO56_01585 | Not Available | Positive | 692364 - 692696 | 11771.7 |
| protein hflc | ALO56_01586 | Not Available | Positive | 692708 - 693736 | 37381.1 |
| cadmium-translocating p-type atpase | ALO56_01587 | P63686 | Positive | 694800 - 696725 | 66830.0 |
| cyclopropane-fatty-acyl-phospholipid synthase | ALO56_04682 | P31049 | Positive | 697015 - 698205 | 44573.1 |
| cardiolipin synthase a | ALO56_01589 | Q87TY7 | Negative | 699184 - 700632 | 54020.5 |
| uncharacterized protein | ALO56_01590 | P31047 | Positive | 700757 - 701311 | 20289.7 |
| n-acetylmuramoyl-l-alanine amidase amic | ALO56_100858 | P63884 | Positive | 701492 - 702736 | 45134.8 |
| uncharacterized protein | ALO56_01591 | Not Available | Negative | 702743 - 703132 | 13893.5 |
| cobalamin synthesis protein/p47k family protein | ALO56_01592 | P31521 | Positive | 703275 - 704483 | 45397.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









