Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01850 | Not Available | Negative | 681741 - 681977 | 8834.37 |
| uncharacterized protein | ALO56_01851 | Not Available | Positive | 682412 - 682879 | 17211.7 |
| monovalent cation/h+ antiporter subunit g | ALO56_01852 | Q9Z3Q3 | Negative | 682898 - 683278 | 13433.7 |
| monovalent cation/h+ antiporter subunit f | ALO56_01853 | Q52983 | Negative | 683275 - 683553 | 10166.0 |
| na antiporter subunit e | ALO56_101471 | Not Available | Negative | 683550 - 683891 | 12995.2 |
| monovalent cation/h+ antiporter subunit d | ALO56_04736 | Q52981 | Negative | 684035 - 685720 | 59872.5 |
| monovalent cation/h+ antiporter subunit c | ALO56_01855 | Q52980 | Negative | 685717 - 686061 | 12290.5 |
| monovalent cation/h+ antiporter subunit a | ALO56_04737 | Q52978 | Negative | 686061 - 688979 | 105783.0 |
| uncharacterized protein | ALO56_01856 | Not Available | Negative | 689137 - 690060 | 32512.2 |
| dna-binding protein | ALO56_01857 | Not Available | Positive | 690166 - 690735 | 21038.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









