Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative s-methyl-5'-thioinosine phosphorylase | ALO56_01833 | Q87ZC3 | Positive | 656633 - 657373 | 26473.8 |
| cytochrome | ALO56_01834 | Not Available | Negative | 657429 - 657968 | 20490.4 |
| endonuclease/exonuclease/phosphatase | ALO56_01835 | P0AAW3 | Positive | 658798 - 659583 | 29200.8 |
| putative membrane protein | ALO56_100128 | P75770 | Positive | 660836 - 661849 | 37837.4 |
| sis domain-containing protein | ALO56_04734 | Not Available | Negative | 661912 - 662826 | 34047.6 |
| carbohydrate kinase pfkb | ALO56_01837 | Q5KYR3 | Positive | 663086 - 665023 | 71514.6 |
| ap endonuclease | ALO56_01838 | P49304 | Positive | 665069 - 665968 | 32909.1 |
| myo-inositol catabolism iolb | ALO56_01839 | Q5KYR2 | Positive | 665982 - 666791 | 29881.1 |
| methylmalonate-semialdehyde dehydrogenase | ALO56_01840 | Q9I702 | Positive | 666819 - 668321 | 53713.7 |
| ioli protein | ALO56_01841 | Not Available | Positive | 668354 - 669181 | 29760.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









