Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_01823 | Not Available | Positive | 645094 - 645480 | 15019.1 |
| fatty acid oxidation complex subunit alpha | ALO56_01824 | Q87ZB2 | Positive | 646068 - 648218 | 77228.9 |
| 3-ketoacyl-coa thiolase | ALO56_01825 | Q4ZRA1 | Positive | 648241 - 649416 | 41629.6 |
| dna topoisomerase 1 | ALO56_04732 | Q9HZJ5 | Positive | 649889 - 652501 | 97201.8 |
| uncharacterized protein | ALO56_01827 | Not Available | Positive | 652594 - 653115 | 19390.3 |
| uncharacterized protein | ALO56_01828 | Not Available | Positive | 653180 - 653413 | 8362.97 |
| cell division inhibitor | ALO56_01829 | Q9HZJ8 | Negative | 653442 - 653912 | 17341.9 |
| lexa repressor | ALO56_01830 | Q87ZB9 | Negative | 653922 - 654530 | 22165.9 |
| regulatory protein, tetr | ALO56_04733 | Not Available | Positive | 654802 - 655521 | 26504.5 |
| beta-hexosaminidase | ALO56_01832 | B7UYS5 | Positive | 655613 - 656623 | 36469.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









