Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerate kinase | ALO56_03960 | P42100 | Positive | 632710 - 633849 | 39117.5 |
| glutathione-dependent formaldehyde-activating protein | ALO56_03961 | E1VBT6 | Negative | 633975 - 634457 | 17974.2 |
| methyl-accepting chemotaxis protein | ALO56_03962 | Not Available | Positive | 634672 - 636297 | 58153.1 |
| n-acylglucosamine 2-epimerase | ALO56_03963 | A0A0P9JFY5 | Positive | 636417 - 637661 | 45940.4 |
| abrb protein | ALO56_03964 | P75747 | Negative | 637677 - 638765 | 38066.2 |
| lysr family transcriptional regulator | ALO56_05151 | P37499 | Positive | 638896 - 639810 | 33648.0 |
| uncharacterized protein | ALO56_03966 | Not Available | Positive | 639894 - 640145 | 8983.08 |
| soluble lytic murein transglycosylase | ALO56_01820 | P0AGC4 | Negative | 640372 - 642300 | 73837.9 |
| abc transporter atp-binding protein | ALO56_01821 | P43672 | Positive | 642492 - 644414 | 70798.2 |
| universal stress protein | ALO56_01822 | Q83AC1 | Negative | 644477 - 644917 | 16013.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









