Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator receiver:transcriptional regulatory protein, c-terminal | ALO56_03952 | P0AD00 | Negative | 620134 - 620844 | 25970.7 |
| putative transporter | ALO56_100191 | Not Available | Negative | 620904 - 621920 | 37230.5 |
| tonb-dependent siderophore receptor | ALO56_03953 | Not Available | Positive | 622118 - 624241 | 77718.4 |
| hypothetical protein | ALO56_05267 | Not Available | Positive | 624244 - 625233 | 35984.5 |
| uncharacterized protein | ALO56_03955 | Not Available | Negative | 625252 - 625905 | 23707.1 |
| hypothetical protein | ALO56_05149 | P42206 | Negative | 626039 - 627517 | 54348.7 |
| major facilitator family transporter | ALO56_05150 | P70786 | Negative | 627429 - 628790 | 48970.4 |
| gntr family transcriptional regulator | ALO56_100300 | Q9X9E0 | Positive | 629121 - 629948 | 30775.0 |
| lipoprotein | ALO56_03958 | Not Available | Negative | 629945 - 631105 | 44170.2 |
| sugar diacid recognition | ALO56_03959 | P37047 | Positive | 631508 - 632599 | 41157.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









