Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein | ALO56_03779 | Not Available | Positive | 605611 - 606345 | 28396.5 |
| uncharacterized protein | ALO56_03780 | Not Available | Positive | 606466 - 607146 | 25973.9 |
| proteinral secretion pathway protein d | ALO56_03944 | P29041 | Positive | 607162 - 608616 | 50868.8 |
| phospholipase/carboxylesterase family protein | ALO56_03945 | Not Available | Positive | 608693 - 609412 | 26039.0 |
| uncharacterized protein | ALO56_03946 | Not Available | Negative | 609526 - 610293 | 28158.5 |
| acriflavin resistance protein | ALO56_05147 | D0ZEW1 | Negative | 612006 - 615068 | 112160.0 |
| rnd family efflux transporter mfp subunit | ALO56_03948 | Not Available | Negative | 615065 - 616150 | 39697.6 |
| rnd family efflux transporter mfp subunit | ALO56_03949 | A6TBH3 | Negative | 616147 - 617346 | 43643.1 |
| 3-hydroxyacyl-coa-acp transferase | ALO56_03950 | O85207 | Negative | 617420 - 618283 | 32205.3 |
| sensor histidine kinase | ALO56_03951 | Not Available | Negative | 618759 - 620156 | 51422.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









