Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glpm family protein | ALO56_03769 | P52112 | Positive | 596050 - 596415 | 13257.8 |
| 2-hydroxychromene-2-carboxylate isomerase | ALO56_03770 | Not Available | Negative | 596433 - 597080 | 24083.2 |
| alpha/beta hydrolase fold protein | ALO56_03771 | Not Available | Negative | 597151 - 598155 | 36374.7 |
| regulatory protein lysr | ALO56_03772 | P45349 | Positive | 599082 - 599999 | 34131.5 |
| mutt/nudix family protein | ALO56_03773 | Not Available | Negative | 600015 - 600425 | 14810.1 |
| d-alanine--d-alanine ligase | ALO56_03774 | Q87XJ6 | Negative | 600422 - 601513 | 38976.8 |
| 50s ribosomal protein l31 type b | ALO56_03775 | Q87XJ5 | Negative | 601666 - 601947 | 10175.7 |
| uncharacterized protein | ALO56_03776 | Not Available | Positive | 602204 - 602359 | 5896.1 |
| putative glutamate synthase | ALO56_03777 | O34849 | Positive | 602582 - 604198 | 59055.8 |
| uncharacterized protein | ALO56_03778 | Not Available | Positive | 604370 - 605500 | 42436.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









