Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen debranching protein glgx | ALO56_05019 | P0A4Y5 | Positive | 574895 - 577102 | 82930.0 |
| uncharacterized protein | ALO56_03292 | Not Available | Positive | 577099 - 578136 | 36931.9 |
| lmbe-like protein | ALO56_03293 | Not Available | Positive | 578129 - 578902 | 27947.2 |
| methyltransferase | ALO56_03294 | Not Available | Positive | 578899 - 579522 | 24036.1 |
| glycosyl transferase family protein | ALO56_03295 | Not Available | Positive | 579494 - 580147 | 23457.8 |
| uncharacterized protein | ALO56_03296 | Not Available | Negative | 580186 - 581256 | 38475.9 |
| fmn-dependent nadh-azoreductase | ALO56_03297 | Q880L8 | Negative | 581595 - 582203 | 21617.5 |
| lysr family transcriptional regulator | ALO56_03298 | Not Available | Negative | 582276 - 583235 | 35180.4 |
| alpha/beta hydrolase fold protein | ALO56_03299 | P00632 | Negative | 583275 - 584069 | 28495.1 |
| uncharacterized protein | ALO56_03300 | Not Available | Negative | 584535 - 584975 | 16644.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









