Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cof protein/had-superfamily hydrolase | ALO56_03281 | P42962 | Negative | 560915 - 561745 | 29775.3 |
| glucose-6-phosphate 1-dehydrogenase | ALO56_03282 | P29686 | Negative | 561738 - 563270 | 57175.6 |
| 6-phosphogluconate dehydrogenase-like protein | ALO56_03283 | G5EBD7 | Negative | 563270 - 564244 | 35101.7 |
| uncharacterized protein | ALO56_03284 | Not Available | Positive | 564556 - 564729 | 6436.98 |
| gnat family acetyltransferase | ALO56_05017 | Not Available | Negative | 564989 - 565537 | 20248.7 |
| glycogen synthase | ALO56_03286 | Q880M9 | Positive | 566075 - 567667 | 58013.2 |
| malto-oligosyltrehalose trehalohydrolase | ALO56_03287 | Q9RX51 | Positive | 567686 - 569503 | 67882.6 |
| 4-alpha-glucanotransferase | ALO56_03288 | P15977 | Positive | 569493 - 571571 | 75726.0 |
| maltooligosyl trehalose synthase | ALO56_03289 | Q44315 | Positive | 571568 - 574351 | 104539.0 |
| uncharacterized protein | ALO56_03290 | Not Available | Positive | 574369 - 574761 | 13591.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









