Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas viridiflava |
| Strain | strain ICMP2848 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | epilithic biofilms; Fresh water; gut; icepacks; irrigation water; lake water; litter; rain; snow; snowpack |
| Biotic relationship | Free-living |
| Host(s) | Homo sapiens, Gallus gallus, Viridiplantae |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1207440 bp
Thymine Count
1189932 bp
Guanine Count
1743648 bp
Cytosine Count
1759805 bp
Genome Length
5902031 bp
Protein-coding Genes
4909 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage integrase, n-terminal sam-like protein | ALO56_05014 | Not Available | Negative | 550583 - 551548 | 35963.0 |
| cointegrate resolution protein t | ALO56_03272 | Not Available | Positive | 551719 - 552726 | 37772.6 |
| sensory box histidine kinase | ALO56_03273 | Q48IV1 | Negative | 552742 - 554043 | 48783.1 |
| glutathione reductase | ALO56_03274 | P23189 | Negative | 554110 - 555471 | 49506.6 |
| utp-glucose-1-phosphate uridylyltransferase | ALO56_03275 | Q59633 | Negative | 555574 - 556413 | 30776.2 |
| uncharacterized protein | ALO56_03276 | Not Available | Positive | 556869 - 557150 | 9626.49 |
| lipoprotein | ALO56_03277 | Not Available | Negative | 557199 - 557549 | 12486.1 |
| uncharacterized protein | ALO56_03278 | Not Available | Positive | 558047 - 558226 | 6573.77 |
| alpha-ketoglutarate-dependent dioxygenase alkb | ALO56_03279 | P05050 | Positive | 558240 - 558929 | 25309.3 |
| glycosyl hydrolase family protein | ALO56_03280 | P71741 | Negative | 558947 - 560767 | 67139.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Spots | Causes | PMC8659605 |
| Streaks | Causes | PMC8659605 |
| Necrosis | Causes | PMC8659605 |
| Rots | Causes | PMC8659605 |
| Kiwifruit blossom blight | Causes | PMC8659605 |
| Pith necrosis | Causes | PMC8659605 |
| Bacterial stem blight disease | Causes | PMC8659605 |
| Soft rot | Causes | PMC8659605 |
| Cankers | Causes | PMC11448091 |
| Tomato pith necrosis | Causes | PMC12847849 |









